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Hanfei Sun

Tongji University

11

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1201

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Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data.

2020 Genome Biology
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Inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data

2019 bioRxiv
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Cistrome Data Browser: expanded datasets and new tools for gene regulatory analysis

2019 Nucleic Acids Research
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VIPER: Visualization Pipeline for RNA-seq, a Snakemake workflow for efficient and complete RNA-seq analysis

2018 BMC Bioinformatics
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Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse

2017 Nucleic Acids Research
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ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

2016 BMC Bioinformatics
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CR Cistrome: a ChIP-Seq database for chromatin regulators and histone modification linkages in human and mouse

2014 Nucleic Acids Research
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JARID1B Is a Luminal Lineage-Driving Oncogene in Breast Cancer

2014 Cancer Cell
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BSeQC: quality control of bisulfite sequencing experiments.

2013 Bioinformatics
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Target analysis by integration of transcriptome and ChIP-seq data with BETA

2013 Nature Protocols
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Citations (270)