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Aleksandra A. Galitsyna

Skolkovo Institute of Science and Technology

21

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297

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Perspectives for the reconstruction of 3D chromatin conformation using single cell Hi-C data.

2021 PLOS Computational Biology
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Studying RNA-DNA interactome by Red-C identifies noncoding RNAs associated with various chromatin types and reveals transcription dynamics.

2020 Nucleic Acids Research
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A machine learning framework for the prediction of chromatin folding in Drosophila using epigenetic features

2020 PeerJ
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Hi-C analysis of genome folding in individual Drosophila cells

2019 Biopolymers & Cell
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Learning DNA folding patterns with Recurrent Neural Networks

2019
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Reconstruction of the chromatin 3D conformation from single cell Hi-C data

2018 BIBM | Bioinformatics and Biomedicine
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Single-cell Hi-C demonstrates that TADs are stable units of Drosophila genome folding that persist in individual cells

2018 BIBM | Bioinformatics and Biomedicine
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Nuclear lamina maintains global spatial organization of chromatin in Drosophila cultured cells

2018 BIBM | Bioinformatics and Biomedicine
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Activation of the alpha-globin gene expression correlates with dramatic upregulation of nearby non-globin genes and changes in local and large-scale chromatin spatial structure

2017 Epigenetics & Chromatin
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"Mirror reads" in Hi-C data

2017
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