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Raunaq Malhotra

Pennsylvania State University

22

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180

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The evolutionary history of a gammaretrovirus currently colonizing the mule deer genome is marked by extensive recombination

2021 bioRxiv
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A computational framework To assess genome-wide distribution Of polymorphic human endogenous retrovirus-K In human populations

2019 PLOS Computational Biology
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Abstract 2348: Low-cost and accurate human leukocyte antigen (HLA) class I typing of The Cancer Genome Atlas on the Seven Bridges Cancer Genomics Cloud

2018 Cancer Research
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A computational framework to assess genome-wide distribution of polymorphic human endogenous retrovirus-K in human populations

2018 bioRxiv
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A random forest classifier for detecting rare variants in NGS data from viral populations

2017 Computational and structural biotechnology journal
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The Cancer Genomics Cloud: Collaborative, Reproducible, and Democratized—A New Paradigm in Large-Scale Computational Research

2017 Cancer Research
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Using the Seven Bridges Cancer Genomics Cloud to Access and Analyze Petabytes of Cancer Data

2017 Current protocols in human genetics
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A Generalized Lattice Based Probabilistic Approach for Metagenomic Clustering

2017 IEEE/ACM Transactions on Computational Biology and Bioinformatics
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A pipeline for identifying integration sites of mobile elements in the genome using next-generation sequencing

2016 BIOINFORMATICS | International Conference on Bioinformatics
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A frame-based representation of genomic sequences for removing errors and rare variant detection in NGS data

2016 arXiv: Genomics
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