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Michael Klann

ETH Zurich

17

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405

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Reaction schemes, escape times and geminate recombinations in particle-based spatial simulations of biochemical reactions

2013 Physical Biology
- Michael Klann
- Heinz Koeppl
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Citations (4)
Coarse-Grained Brownian Dynamics Simulation of Rule-Based Models

2013 CMSB | Computational Methods in Systems Biology
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Hybrid spatial Gillespie and particle tracking simulation

2012 Bioinformatics
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Spatial Modeling of Vesicle Transport and the Cytoskeleton: The Challenge of Hitting the Right Road

2012 PLOS ONE
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Agent-based simulation of reactions in the crowded and structured intracellular environment: Influence of mobility and location of the reactants

2011 BMC Systems Biology
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Parallelized agent-based simulation on CPU and graphics hardware for spatial and stochastic models in biology

2011 CMSB | Computational Methods in Systems Biology
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Parallelized Agent-based Simulation on CPU and Graphics Hardware for Spatial and Stochastic Models in Biology Categories and Subject Descriptors

2011
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3D visualization of concentrations from stochastic agent-based signal transduction simulations

2010 ISBI | International Symposium on Biomedical Imaging
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Stochastic Simulation of Signal Transduction: Impact of the Cellular Architecture on Diffusion

2009 Biophysical Journal
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Visualization of signal transduction processes in the crowded environment of the cell

2009 PacificVis | IEEE Pacific Visualization Symposium
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Citations (24)