Molecular Dynamics

Related Fields

Parent Topic:

Physics, Chemistry, Computational chemistry, Quantum mechanics

Child Topic:

Depletion force, Hard spheres, Newmark-beta method, Contact order, ABINIT, Drug discovery, Protein tertiary structure, Quantum ESPRESSO, Solvation shell, Newtonian dynamics, Intermolecular force, Threading, Car–Parrinello method, Cell lists, Drug design, Molecular modelling, Kuhn length, Carrier protein, Chevron plot, Peptide plane flipping, Metadynamics, Water model, Berendsen thermostat, Newton–Cotes formulas, Downhill folding, Coulomb explosion, Computer bridge, Free energy perturbation, Constraint algorithm, Lattice protein, Pharmacophore, Local Elevation, Collision response, Statistical potential, Rate of convergence, Pseudopotential, Polyelectrolyte adsorption, Hydrophobic collapse, Protein pKa calculations, Loop modeling, Minnesota Functionals, Anton, Embedded atom model, Inversion temperature, Extended discrete element method, Thermal conductivity measurement, Discrete element method, Numerical methods for ordinary differential equations, Monte Carlo method, Stochastic, Dynamic Monte Carlo method, Schur complement method, Equilibrium unfolding, Variance reduction, Folding funnel, Parallel tempering, Hot tower, Conformational entropy, CALPHAD, AAA proteins, Barnes–Hut simulation, Homology modeling, Transition path sampling, Accessible surface area, Energy landscape, Native contact, Multiscale modeling, Molecular motor, Symplectic integrator, Hybrid functional, Rubber elasticity, Protein folding, Coffee ring effect, Variational integrator, Gauss–Jacobi quadrature, van der Waals force, Native state, Quasi-Monte Carlo method, Semi-implicit Euler method, Hamaker constant, Bond order potential, Docking, Projector augmented wave method, CASTEP, Solvation, Energy drift, XMD, Membrane protein, Thermal effusivity, Reverse Monte Carlo, kT, Linear multistep method, Vacuum furnace, P3M, Fast multipole method, Molecular mechanics, CASP, Vienna Ab-initio Simulation Package, Heat transfer physics, Denaturation midpoint, Z-matrix, Orientations of Proteins in Membranes database, Excimer, Intramolecular force, Ewald summation, Potential of mean force, Local-density approximation, Levinthal's paradox, Kinetic Monte Carlo, Distributed multipole analysis, Thermodynamic integration, Bilayer, Brownian motor, Periodic boundary conditions, Lennard-Jones potential, Spartan, Coacervate, Brownian dynamics, Merck Molecular Force Field, Kohn–Sham equations, Melting-point depression, Implicit solvation, MODELLER, Energy minimization, Self-assembly of nanoparticles, Vibronic coupling, QM/MM, Beta bulge, Time-dependent density functional theory, Low-discrepancy sequence, Protein design, Partial charge, BamHI, Moist static energy, Rare Event Sampling, Leapfrog integration, Material properties, Nyström method, Collision cascade, Integrated computational materials engineering, Buckingham potential, Thermal diffusivity, Anfinsen's dogma, Ion beam mixing, Moens–Korteweg equation, CP2K, Rational design, Cohesion, Umbrella sampling, Synthetic setae, Dissipative particle dynamics, Gaussian, Molecular propeller, OPLS, Verlet integration, Bennett acceptance ratio, Nosé–Hoover thermostat, Bond strength, Car–Parrinello molecular dynamics, Force field, Phi value analysis, Protein structure prediction, Knobs into holes packing, Feshbach resonance, Hydrophobicity scales, Virtual screening, Monte Carlo molecular modeling, Searching the conformational space for docking, Electrostatic spray-assisted vapour deposition, Crystal structure prediction

Top Authors

Paper Recommendation
1974 Improved Simulation of Liquid Water By Molecular Dynamics

1971 Molecular Dynamics Study of Liquid Water

1981 Polymorphic Transitions in Single Crystals: A New Molecular Dynamics Method

1982 A Computer Simulation Method For The Calculation of Equilibrium Constants For The Formation of Physical Clusters of Molecules: Application To Small Water Clusters

1987 Crystallographic R Factor Refinement By Molecular Dynamics

1994 Projector Augmented-wave Method

1999 From Ultrasoft Pseudopotentials To The Projector Augmented-wave Method

1983 Computer ‘‘experiment’’ For Nonlinear Thermodynamics of Couette Flow

1976 Molecular Dynamics Study of An Amorphous Lennard‐Jones System at Low Temperature

1967 Perturbation Theory and Equation of State For Fluids. II. A Successful Theory of Liquids

1971 Equilibrium Thermodynamic Properties of The Mixture of Hard Spheres

1992 Relaxation Processes in Supercooled Liquids

1987 The Rapid Evaluation of Potential Fields in Particle Systems

1984 Molecular Dynamics With Coupling To An External Bath

1977 Numerical integration of The Cartesian Equations of Motion of A System With Constraints: Molecular Dynamics of N -alkanes

1970 Studies in Molecular Dynamics. VIII. The Transport Coefficients For A Hard‐Sphere Fluid

1984 An Accurate and Efficient Scheme For Propagating The Time Dependent Schrödinger Equation

1972 Liquid Water: atom Pair Correlation Functions From Neutron and X‐Ray Diffraction


1983 A Study of Solid and Liquid Carbon Tetrafluoride Using The Constant Pressure Molecular Dynamics Technique