A Photo‐Switchable Peptide Fibril Esterase
Mousumi SamantaN. SaadDinghao WuNiek S. A. CroneKarina Abramov‐HarpazClil RegevRivka Cohen‐LuriaAimee L. BoyleYifat MillerAlexander KrosGonen Ashkenasy
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Abstract:
Recent attempts to mimic enzyme catalysis using simple, short peptides have been successful in enhancing various reactions, but the on-demand, temporal or spatial regulation of such processes by external triggers remains a great challenge. Light irradiation is an ideal trigger for regulating molecular functionality, since it can be precisely manipulated in time and space, and because most reaction mediums do not react to light. We herein report the selection of a photo-switchable amphiphilic peptide catalyst from a small library of isomeric peptides, each containing an azobenzene-based light responsive group and a catalytic histidine residue. In its native fibrillar form, the selected peptide is efficiently and enantio-selectively active for ester hydrolysis, but after irradiation by UV light inducing trans-to-cis azobenzene isomerization, the fibrils disassemble to amorphous aggregates that are much less catalytically active. Significantly, this esterase-like activity can be manipulated multiple times, as the fibrillar peptide assembly is reversibly reduced and restored upon alternate irradiation by UV and visible light, respectively. We propose that this research may shine light on the origin of complex functions in early chemical evolution. Furthermore, it paves the way to regulate additional functions for peptide nanotechnology, such as replication, charge transfer, and delivery.Keywords:
Esterase
Collagen fibril
The collagen fibril diameter distribution of four immature tissues from both rat and sheep have been determined from the transverse sections observed in the transmission electron microscope. In many instances before birth, the form of the distribution for the tissues is both unimodal and sharp and the mean diameters of the distributions lie close to a multiple of 80 A. For some tissues, the collagen fibril diameter distributions may be resolved into a number of components, each of which represents a population of fibrils with a diameter close to a multiple of 80 A (8 nm). These data confirm and extend previous observations by the authors that small collagen fibrils growth occurs by the accretion of 80 A units. The form of the collagen fibrils diameter distribution at birth is broad for the sheep tissues but narrow for the rat tissues, thus confirming that the range of fibril diameters at this stage of life reflects the differing degree of development of precocious and altricious animals.
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To elucidate the origin of collagen hyperfibrils, we have ultrastructurally investigated the development of collagen fibrils after in situ treatment of liver tissue sections by different proteolytic enzymes. After treatment, collagen fibrils were largely disorganized within the same fibril bundle. A wide range in diameters was observed. Hyperfibrils, which correspond to those fibrils with the largest diameters and having a flower-like section, were present. On the basis of these results, we can suggest that hyperfibrils reflect breakdown states of collagen fibrils.
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In 25 human intervertebral discs studied by electron microscopy, sheathing collagen-like fibrils by electron-dense cylinders was observed. The sheaths consisted of layers of dense granules 3 to 12 times the diameter of the enclosed collagen-like fibrils, and they appeared to be more frequent in older discs.
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Abstract An electron microscope study of collagen fibrils from fixed tail tendons of rats has revealed that from some time shortly after birth until maturity, the fibril diameters have a bimodal distribution. The “two” types of fibril are indistinguishable in both transverse and longitudinal section. Unfixed specimens of eight‐week‐old‐tail tendon showed a similar bimodal distribution of diameters though the positions of the peak values compared to fixed specimens of an eight‐week‐old‐tail tendon were shifted upwards by about 30%. It has also been shown quantitatively that the polar collagen fibrils are directed randomly “up” and “down” with respect to their neighbors. Whilst it has been suggested by others that anastomosis is a feature of collagen structure, the results presented here do not support this hypothesis. Fibrillar units ∼ 140 Å in diameter have been observed and the possibilities that these are elastic fibers or the breakdown products of collagen fibrils have been considered.
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By using ultramorphological and biochemical methods, we analyzed the regional differences between the three parts of the equine superficial digital flexor tendon (SDFT), namely, the myotendinous junction (MTJ), middle metacarpal (mM), and osteotendinous junction (OTJ). Cross-sectional images showed unique distributions of collagen fibrils of varying diameters in each region. Small collagen fibrils (diameter <100 nm) were distributed predominantly in the MTJ region, and the OTJ region was relatively rich in large collagen fibrils (diameter >200 nm). In the mM region, the collagen fibrils were intermediately distributed between the MTJ and OTJ. The results indicate a graded arrangement of collagen fibrils in the tendon. Type V collagen was detected preferentially in the MTJ region. Since type V collagen is believed to be one of the collagens regulating collagen fibril formation, its possible functionality in the MTJ region in terms of fibril formation and fibril arrangement in the tendon has been discussed here.
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