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    Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. GowerJoshua D. CampbellLingqi LuoXiao Hui ZhangXiao‐Jun JiYuriy O. AlekseyevShenglong WangShawn LevyPierre P. MassionMarc E. LenburgAvrum Spira
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    Abstract:
    Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Keywords:
    RNA-Seq
    Table (database)
    Topics:
    Cancer-related molecular mechanisms research
    RNA modifications and cancer
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    Supplementary Table 10 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 10 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
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    Supplementary Table 3 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 3 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
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    Supplementary Table 7 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 7 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
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    Supplementary Table 1 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 1 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
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    Transcriptome Analysis of Cattle Embryos Based on Single Cell RNA-Seq
    Pakistan Journal of Zoology (2022)
    Jie WangDi FangJianqing ZhaoFei HuangБо Лю
    Fenneropenaeus chinensis is an important fishery species in China.Hatchery-reared seeds have been released into the wild for improvement of shrimp productivity.Jinzhou bay is the major natural habitat and we used this location to temporally monitor the genetic effects of release of hatchery stocks on local F. chinensis populations across five years.A set of 13 microsatellite markers were used to evaluate genetic patterns across 2015, 2016 and 2019.We observed a significant Hardy-Weinberg disequilibrium across all stocks.The inbreeding coefficient (F is ) was positive (0.121-0.131) for all stocks.A loss of genetic diversity was detected in the 2019 stock and significant differences were observed for number of different alleles, number of effective alleles, allelic richness and unbiased expected heterozygosity in the 2019 stock (P < 0.05).The highest pairwise relatedness and the lowest observed heterozygosity were also observed in 2019 stock.Moreover, a small but significant genetic differentiation was detected between the 2019 stock and the stocks of the previous two years.Given the continuously large scale of artificial enhancements in this area, these data may indicate that releases of hatchery-reared F. chinensis individuals may be associated with inbreeding and potentially the reduction in genetic diversity of the F. chinensis population.
    RNA-Seq
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    Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Supplementary Table 6 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 6 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
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    Identification of Salt Stress Response Genes in Rosa chinensis Leaves by Comparative RNA-seq Analysis of Transcriptome Dynamics
    Russian Journal of Plant Physiology (2018)
    Xin‐Xia TianWang ZhQ. ZhangHuaCong CiP. Wang
    RNA-Seq
    Identification
    Plant Physiology
    Citations (3)
    Supplementary Table 9 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 9 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
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    Collembola Regulate Biological Processes of a Plant: Evidence from a Rna-Seq-Based Transcriptome Analysis
    Matthieu ChauvatIsabelle BoulogneVictor BailleulAudrey BeaufilsCaroline Bérard
    Collembola generally have a positive impact on plant growth and these effects are often attributed to the improvement of soil nutrients availability. However, the involved mechanisms have not been elucidated. We thus performed a comparative transcriptomic analysis of Poa annua in the presence and absence of Folsomia candida. We found that only 6 genes were up-regulated and 1080 down-regulated with Collembola. This first gene ontology analysis could imply that collembola down-regulate protein metabolic processes and defense response to microorganisms of P. annua, and would thus reduce abiotic and biotic stress for plants.
    RNA-Seq
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