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    Deep Sequencing of the Transcriptome Reveals Inflammatory Features of Porcine Visceral Adipose Tissue
    International Journal of Biological Sciences (2013)
    Tao WangAnan JiangYanqin GuoYa TanGuoqing TangMiaomiao MaiHaifeng LiuJian XiaoMingzhou LiXuewei Li
    31
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    Abstract:
    Functional differences in the different types of adipose tissue and the impact of their dysfunction on metabolism are associated with the regional distribution of adipose depots.Here we show a genome-wide comparison between the transcriptomes of one source of subcutaneous and two sources of visceral adipose tissue in the pig using an RNA-seq approach.We obtained ~32.3 million unique mapped reads which covered ~80.2% of the current annotated transcripts across these three sources of adipose tissue.We identified various genes differentially expressed between subcutaneous and visceral adipose tissue, which are potentially associated with the inflammatory features of visceral adipose tissue.These results are of benefit for understanding the phenotypic, metabolic and functional differences between different types of adipose tissue that are deposited in different body sites.
    Keywords:
    RNA-Seq
    Topics:
    Adipokines, Inflammation, and Metabolic Diseases
    Adipose Tissue and Metabolism
    Peroxisome Proliferator-Activated Receptors
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    Supplementary Table 10 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 10 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Supplementary Table 3 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 3 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Supplementary Table 7 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 7 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Supplementary Table 4 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 4 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 5 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Supplementary Table 4 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 4 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Supplementary Table 1 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 1 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)
    Identification of Salt Stress Response Genes in Rosa chinensis Leaves by Comparative RNA-seq Analysis of Transcriptome Dynamics
    Russian Journal of Plant Physiology (2018)
    Xin‐Xia TianWang ZhQ. ZhangHuaCong CiP. Wang
    RNA-Seq
    Identification
    Plant Physiology
    Citations (3)
    Supplementary Table 10 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    Jennifer BeaneJessica VickFrank SchembriChristina AnderlindAdam C. Gower
    Supplementary Table 10 from Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq
    RNA-Seq
    Table (database)
    Citations (0)