ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles

Tiago C. Silva,Simon G. Coetzee,Nicole Gull,Lijing Yao,Dennis J. Hazelett,Houtan Noushmehr,De-Chen Lin,Benjamin P. Berman,Oliver Stegle

ELMER v.2: an R/Bioconductor package to reconstruct gene regulatory networks from DNA methylation and transcriptome profiles

2019

Tiago C. Silva
Simon G. Coetzee
Nicole Gull
Lijing Yao
Dennis J. Hazelett
Houtan Noushmehr
De-Chen Lin
Benjamin P. Berman
Oliver Stegle

AbstractMotivation. DNA methylation has been used to identify functional changes at transcriptional enhancers and other cis-regulatory modules (CRMs) in tumors

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