Transcriptional interactions suggest niche segregation among microorganisms in the human gut

Damian Rafal Plichta,Agnieszka S. Juncker,Marcelo Bertalan,Elizabeth A. Rettedal,Laurent Gautier,Encarna Varela,Chaysavanh Manichanh,Charlène Fouqueray,Florence Levenez,Trine Nielsen,Joël Doré,Ana Manuel Dantas Machado,Mari Cristina Rodriguez de Evgrafov,Torben Hansen,Torben Jørgensen,Peer Bork,Francisco Guarner,Oluf Pedersen,Morten Otto Alexander Sommer,S. Dusko Ehrlich,Thomas Sicheritz Ponten,Søren Brunak,H. Bjørn Nielsen

Transcriptional interactions suggest niche segregation among microorganisms in the human gut

2016

Transcriptional interactions between co-existing microorganisms from stool samples revealed enriched interactions involved in H2 and CO2 homeostasis, butyrate biosynthesis, ABC transporters, flagella assembly, bacterial chemotaxis and metabolism.

Keywords:

Microorganism
Chemotaxis
Cell biology
Microbiome
Gene expression profiling
ATP-binding cassette transporter
Flagellum
Niche segregation
Microbial ecology
Bioinformatics
Biology

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