Pedobacter solisilvae sp. nov., isolated from forest soil
2017
The bacteria strain EN12T was isolated from forest soil in the Republic of Korea. The cells were Gram-negative, non-motile and rod-shaped, and the strain was strictly aerobic. Phylogenetic analysis of its 16S rRNA gene sequences showed that strain EN12T belonged to the class
Sphingobacteriia
of the phylum
Bacteroidetes
, and its closest relative is
Pedobacter namyangjuensis
5G38T, with a sequence similarity of 95.5 %. The average DNA sequence similarity from validly described species within the genus
Pedobacter
was 92.5±1.3 %. Chemotaxonomic data including major ubiquinones (menaquinone-7), polar lipids (phosphatidylethanolamine and sphingolipid) and fatty acids (iso-C15 : 0, iso-C17 : 0 3-OH, and C16 : 1
ω6c/C16
: 1
ω7c) also supported an affiliation of strain EN12T with the genus
Pedobacter
. Genotypic and phenotypic differentiation of strain EN12T from six published
Pedobacter
species was revealed through DNA–DNA relatedness and physiological/biochemical tests. Results of these phenotypic, phylogenetic and chemotaxonomic analyses indicated that strain EN12T is a novel species in the genus
Pedobacter
, for which we propose the name
Pedobacter
solisilvae sp. nov. (=KCTC 42612T=LMG 28820T).
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