Whole genome sequencing of ESBL-producing Escherichia coli isolated from patients, farm waste and canals in Thailand.

Chakkaphan Runcharoen,Kathy E. Raven,Sandra Reuter,Teemu Kallonen,Suporn Paksanont,Jeeranan Thammachote,Suthatip Anun,Beth Blane,Julian Parkhill,Sharon J. Peacock,Narisara Chantratita

Whole genome sequencing of ESBL-producing Escherichia coli isolated from patients, farm waste and canals in Thailand.

2017

Chakkaphan Runcharoen
Kathy E. Raven
Sandra Reuter
Teemu Kallonen
Suporn Paksanont
Jeeranan Thammachote
Suthatip Anun
Beth Blane
Julian Parkhill
Sharon J. Peacock
Narisara Chantratita

Background Tackling multidrug-resistant Escherichia coli requires evidence from One Health studies that capture numerous potential reservoirs in circumscribed geographic areas.

Keywords:

Escherichia coli
Bioinformatics
Genetics
Human genetics
Biotechnology
Genome
Systems biology
Whole genome sequencing
Biology
Tobramycin
Ciprofloxacin
Gentamicin
Trimethoprim
Colistin
Microbiology
Carbapenem
Multiple drug resistance

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