Specific features of Zn2+, Co2+ and Ni2+ ion binding to DNA in alkaline solutions

Abstract Dependence of DNA metallization degree during B-DNA transition into the metallized (m) form on DNA concentration has been studied by visible and differential UV-spectroscopy in the presence of Zn 2+ , Co 2+ and Ni 2+ ions in tetraborate buffer (pH 8.5) with and without ethidium bromide. Constants of Mt 2+ binding to double stranded DNA were calculated. The obtained binding constants corresponded to the formation of inter-strand metal bridges stabilizing m-form. Thermodynamic origin of higher efficiency of Zn 2+ ions in DNA metallization compared to Co 2+ and Ni 2+ was revealed. Increase of the DNA helix-coil transition temperature by up to 10 °С upon formation of m-form in the presence of Zn 2+ ions was observed and rationalized. Furthermore, a strong cooperative decrease (up to 30 °С) of the temperature of В → m transition induced by heating in the presence of Zn 2+ was found and its nature was explained.