Genetic Identification of Chinook Salmon: Stock-Specific Distributions of Juveniles along the Washington and Oregon Coasts

AbstractWe used microsatellite DNA data and genetic stock identification methods to delineate the temporal and spatial distributions of juvenile Chinook Salmon Oncorhynchus tshawytscha occupying coastal habitats extending from central Oregon to northern Washington. Juveniles were collected in trawl surveys conducted during spring, summer, and autumn over 15 years. Distributions (mean latitude and distance from shore) differed between yearling and subyearling life history types and between stocks; many of these differences were consistent across years. Yearlings were nearly all (98%) from Columbia River sources, and only 6% were naturally produced. In late May, yearlings from the lower Columbia and Willamette rivers were farther north than other yearlings, likely due to the early spring timing of their releases from hatcheries and subsequent out-migration from the Columbia River. However, yearling distributions in late June reflected known migration behaviors. Yearlings from interior Columbia and Snake Riv...