Association mapping, patterns of linkage disequilibrium and selection in the vicinity of the PHYTOCHROME C gene in pearl millet.

Abdoul-Aziz Saïdou,Jérémy Clotault,Marie Couderc,Cédric Mariac,Katrien M. Devos,Anne-Céline Thuillet,Ibrahim Amoukou,Yves Vigouroux

Association mapping, patterns of linkage disequilibrium and selection in the vicinity of the PHYTOCHROME C gene in pearl millet.

2014

Abdoul-Aziz Saïdou
Jérémy Clotault
Marie Couderc
Cédric Mariac
Katrien M. Devos
Anne-Céline Thuillet
Ibrahim Amoukou
Yves Vigouroux

Key message Linkage analysis confirmed the association in the region of PHYC in pearl millet. The comparison of genes found in this region suggests that PHYC is the best candidate.

Keywords:

Genetics
Botany
Linkage disequilibrium
Gene
Biology
Association mapping
Markov chain Monte Carlo
Genetic linkage
Phytochrome
Trait
Polymorphism (computer science)
Quantitative trait locus
Candidate gene
Inbred strain

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