Abstract PR19: Monitoring of melanoma progression utilizing multiplatform biomarkers of blood cell-free DNA

Blood biopsies utilizing cell-free DNA (cfDNA) represent an alternative, minimally invasive source that permits repeated sampling to enable melanoma patient monitoring during treatment and follow-up. However, the sensitivity of cfDNA biomarker detection is limited to tumor sampling availability, which can vary significantly. This encourages the use of multiplatform biomarkers to improve sensitivity in assessing melanoma progression. Here we explored the detection of different cfDNA biomarker types, DNA mutations and copy number amplification (CNA), in blood of melanoma patients. To assess the utility of these cfDNA biomarker types, we utilized a highly sensitive multigene (54-gene cancer panel) digital next-generation sequencing (NGS) assay containing 0.1% sensitivity or multiplex droplet digital PCR ddPCR. cfDNA mutations were assessed by a multigene digital NGS assay in a cohort of preoperative stage III/IV patients rendered disease-free (n=44), whereby 75% of patients had detectable cfDNA genomic aberrations. Patients with high tumor mutation burden (TMB) (≥3 mutations) were associated with worse overall survival (OS) (p=0.048) compared to those with Citation Format: David S. Hoon, Selena Y. Lin, Rebecca Gentry, Steve O’Day. Monitoring of melanoma progression utilizing multiplatform biomarkers of blood cell-free DNA [abstract]. In: Proceedings of the AACR Special Conference on Melanoma: From Biology to Target; 2019 Jan 15-18; Houston, TX. Philadelphia (PA): AACR; Cancer Res 2020;80(19 Suppl):Abstract nr PR19.