Physical processes controlling bacterial distribution and variability in the upper St. Lawrence estuary

The vertical structure of the water column and the spatial distribution and semidiurnal variability of bacteria were investigated at six stations in the upper St. Lawrence estuary. The σ1 profiles indicate that the upper St. Lawrence is a partially mixed estuary. Stratification results from buoyancy input from the freshwater outflow of the St. Lawrence River, and its variability is controlled by tidal and, to a lesser extent, wind mixing. Calculations show that tidal mixing largely exceeds mixing caused by wind. Free and attached bacteria presented different patterns of spatial distribution and temporal variability. Free bacteria exhibited highest mean concentrations at the freshwater station (3.5–4.4 106ml−1) and lowest concentrations at the downstream stations (0.3–0.5 106ml−1); their numbers declined exponentially relative to salinity. Attached bacteria had highest mean concentrations (3.2–5.5 106ml−1) at salinities between 0.5 and 5 and were virtually absent at downseam stations (<0.05 106ml−1). The importance of semidiurnal variability was demonstrated Over the idal cycle, variability of attached bacteria was always greater than that of free bacteria. The analysis of causal models between salinity and free and attached bacteria, showed that the two types of bacteria are uncoupled and that both types have a strong relationship with salimity. Physical processes are thus important controlling factors of the distribution and variability of bacteria. Results suggest that large-scale processes, such as freshwater outflow and residual circulation, largely control free bacteria, whereas short-term and more local processes (e.g., sediment resuspension caused by wind) may also be important in the control of attached bacteria.