Influence of alkanethiol self-assembled monolayers with various tail groups on structural and dynamic properties of water films

Molecular dynamics simulations are performed to investigate the structural and dynamic properties of a water layer lying on a clean Au(111) surface and on alkanethiol self-assembled monolayers (SAMs) with three different tail groups: methyl, carboxyl, and hydroxyl. The effects of these functional groups on the local structure of the water are quantified by analyzing the reduced density profiles of the oxygen and hydrogen atoms, the average number of hydrogen bonds, and the distribution of the OH bond angle, respectively. Meanwhile, the dynamic properties of the water layer are evaluated by analyzing the diffusion coefficients of the water molecules in the xy-plane and z-direction. The simulation results indicate that in both the hydrophobic and the hydrophilic alkanethiol SAMs, the formation of a two-layer water structure is suppressed. And the water molecules can approach the SAMs composed of hydroxyl tails most closely and SAMs composed of methyl tails furthest. Due to the existence of hydrogen bonds b...