Highly Selective Hydrolysis of Chloropyrimidines to Pyrimidones in 12 N Hydrochloric Acid

2006 
A chromatography-free process for synthesis of 6-piperazinyl-2,4-bis-pyrrolidinylpyrimidine in isomerically pure form is described. The key step is the purification of a crude 6-chloro-2,4-bis-pyrrolidinylpyrimidine/2-chloro-4,6-bis-pyrrolidinylpyrimidine isomer mixture (generated by reaction of 2,4,6-trichloropyrimidine with pyrrolidine) by a highly selective acid-catalyzed hydrolysis of the 2-chloro isomer to the pyrimidone. The 2-chloro isomer hydrolyzes 350 times faster than the 6-chloro isomer in 6 N HCl and 1750 times faster in 12 N HCl. To put these rate ratios in perspective, the 2-chloro isomer reacts with amines and alkoxides only ∼10−17 times faster than does the 6-chloro isomer. A mechanistic investigation using methodological tools developed by Bunnett established that the transition state for hydrolysis of the 6-chloro isomer involves two more molecules of water (each acting as a base) than does the transition state for hydrolysis of the 2-chloro isomer. As the concentration of HCl increases...
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