A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome.

Wayne E. Clarke,Erin E. Higgins,Joerg Plieske,Ralf Wieseke,Christine Sidebottom,Yogendra Khedikar,Jacqueline Batley,Dave Edwards,Jinling Meng,Ruiyuan Li,Cynthia T. Lawley,Jérôme Pauquet,Benjamin Laga,Wing Cheung,Federico L. Iniguez-Luy,Emmanuelle Dyrszka,Stephen Rae,Benjamin Stich,Rod J. Snowdon,Andrew G. Sharpe,Martin W. Ganal,Isobel A. P. Parkin

A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome.

2016

Key message TheBrassica napusIllumina array provides genome-wide markers linked to the available genome sequence, a significant tool for genetic analyses of the allotetraploidB. napusand its progenitor diploid genomes.

Keywords:

Botany
Genetics
Genetic marker
Ploidy
Locus (genetics)
Genome
Biology
SNP genotyping
Genotyping Techniques
Single-nucleotide polymorphism
Whole genome sequencing
single locus
Brassica

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