Density functional theory and RRKM calculations of decompositions of the metastable E-2,4-pentadienal molecular ions

The potential energy profiles for the fragmentations that lead to [C5H5O]+ and [C4H6]+• ions from the molecular ions [C5H6O]+• of E-2,4-pentadienal were obtained from calculations at the UB3LYP/6-311G + + (3df,3pd)//UB3LYP/6-31G(d,p) level of theory. Kinetic barriers and harmonic frequencies obtained by the density functional method were then employed in Rice–Ramsperger–Kassel–Marcus calculations of individual rate coefficients for a large number of reaction steps. The pre-equilibrium and rate-controlling step approximations were applied to different regions of the complex potential energy surface, allowing the overall rate of decomposition to be calculated and discriminated between three rival pathways: CH bond cleavage, decarbonylation and cyclization. These processes should have to compete for an equilibrated mixture of four conformers of the E-2,4-pentadienal ions. The direct dissociation, however, can only become important in the high-energy regime. In contrast, loss of CO and cyclization are observable processes in the metastable kinetic window. The former involves a slow 1,2-hydrogen shift from the carbonyl group that is immediately followed by the formation of an ion-neutral complex which, in turn, decomposes rapidly to the s-trans-1,3-butadiene ion [C4H6]+•. The predominating metastable channel is the second one, that is, a multi-step ring closure which starts with a rate-limiting cis—trans isomerization. This process yields a mixture of interconverting pyran ions that dissociates to the pyrylium ions [C5H5O]+. These results can be used to rationalize the CID mass spectrum of E-2,4-pentadienal in a low-energy regime. Copyright © 2010 John Wiley & Sons, Ltd.