Urocystis agropyri

Urocystis agropyri is a fungal plant pathogen that causes flag smut on wheat. The flag smut fungus, U. agropyri, is a basidiomycete. It produces basidiospores and teliospores. This pathogen is found globally, but is most problematic in Australia and India. Urocystis agropyri infects wheat (Tritiicum aestivum L.), among other grass species. Relatives of U. agropyri infect other grasses and are frequently identified as the causal organism of flag smut on wheat, but there is debate still as to whether they are the same organism or different strains. Flag smut is a systemic disease that starts in young tissues. Early symptoms include 'leprous' spots and bending or twisting of coleoptiles. Older plant leaves have white striations that eventually turn silvery gray, which is evidence of the pathogen's impending sporulation. Additionally, infected plants may have stunted growth, increased leaf production, sterile seeds, and failure to produce heads or have successful leaf expansion. Leaves will appear streaked with stripes, which are white, gray or black. The leaf discoloration is due to fungal structures called sori, which are clusters of spore-bearing structures. During sporulation, sori burst through leaves releasing teliospores and cause leaves to appear tattered. These spores are reddish brown, smoothly rounded, and they tend to be in clumps of 5-6 with sterile cells around them. The clumped spores are often referred to as 'spore balls' and measure about 20-50 microns. Large quantities of U. agropyri spores look like brown or black dust. U. agropyri produces teliospores, which may be wind dispersed or distributed through soils via machinery or animals. In soil, a dikaryotic teliospore germinates, meiosis occurs, then mitosis, and this gives rise to up to four basidiospores, each containing a single nucleus. Basidiospores germinate on seedlings, and each hypha undergoes plasmogamy with a compatible hypha. In this, one nucleus transfers to the other hypha, reestablishing the dikaryotic state of the fungus. The hyphae form appressoria which penetrate the coleoptile of an emerging seeds' shoot through the epidermal tissue, then hyphae grow between vascular bundles of the leaves. Some hyphal cells give rise to smut sori, bearing teliospores, which emerge through the leaf tissue for wind dispersal. Teliospores come to rest in soils, and when conditions are right, they give rise to more basidiospores, further spreading the infection. Alternatively, teliospores can form in seeds when the mycelia grows throughout the plant, in which case they germinate within the seed to give rise to new infection, again via basidiospore production. Teliospores overwinter in the soil, senescent plant tissues, and in seeds. These spores maintain germination viability for 3–7 years. This pathogen prefers arid summers, moderate temperatures, and mild winters. Flag smut fungi germinate in dry soils when the temperature ranges from 40-80 °F. Flag smut has been reported in Australia, the United States, Canada, South Africa, China, Japan, India, Egypt, and Pakistan. Cultivation practices that leave plant debris on soil surfaces enhances U. agropyri's success, as does sowing wheat in winter rather than spring. Mild winters improves the pathogen's ability to establish infections for seeds sown in autumn or winter; spring plantings give the fungus less opportunity to establish. Generally, strategies to prevent flag smut include use of disease resistant cultivars, chemical seed treatments, and crop rotation to reduce amount of inocula present. Since U. agropyri spores germinate in dry soils, maintaining wetter soils helps to diminish their viability. Carboxin is a commonly used fungicide on seeds, which works well to prevent onset of disease. In addition to seed treatments, application of systemic fungicides early in the growing season and at low doses is effective at controlling the disease. Sowing seeds shallowly in soil also helps to reduce disease occurrence.