Relatively recently, temperate regions in North America were covered by extensive ice sheets, making them inhospitable to contemporary flora and fauna. Since the retreat of the ice sheets, these regions have been recolonized by a diversity of taxa, some of which have undergone rapid postglacial divergence. Evidence supports the hypothesis that some taxa persisted in unglaciated refugia during the Last Glacial Maximum, such as on Haida Gwaii (formerly the Queen Charlotte Islands). Many taxa on Haida Gwaii are genetically distinct from mainland populations at neutral molecular markers possibly as the result of isolation in refugia or postglacial colonization. The Golden-crowned Kinglet (Regulus satrapa Lichtenstein, 1823) is a continentally distributed, short-distance migratory passerine inhabiting mature conifer forests including those on Haida Gwaii. We used five microsatellite markers and a 568 base-pair fragment of the mitochondrial control region to determine the likelihood that Haida Gwaii region acted as a refugium for this species during the last ice age. We report significant gene flow between Haida Gwaii and the western North American mainland from mitochondrial markers, but significant population genetic differentiation at nuclear markers. We also report genetic divergence between eastern and western Golden-crowned Kinglets, as well as higher genetic diversity and population substructuring within the western population than within the eastern population. The east–west differentiation probably arose due to isolation in separate Pleistocene refugia south of the ice sheets. However, population differences within the west are likely caused by more recent processes; contemporary differentiation of Haida Gwaii Golden-crowned Kinglets most likely occurred postglacially.
Abstract Ancient Murrelets (Synthliboramphus antiquus) are subarctic seabirds that breed on islands from British Columbia through Alaska to China. In this study, we used sequence variation in the mitochondrial control region and cytochrome b gene to estimate the extent of genetic differentiation and gene flow among populations both within British Columbia and across the North Pacific. Results suggest that genetic differentiation is low and female-mediated gene flow is high among colonies within British Columbia, in agreement with banding studies. Surprisingly, genetic differentiation appears to be low and gene flow high between British Columbia and Asia. The effective female population size appears to be stable, but the species may have undergone a range expansion. These results suggest that Ancient Murrelets from throughout the North Pacific may represent a single management unit for conservation. El ADN Mitocondrial Sugiere Alto Flujo Génico en Synthliboramphus antiquus Resumen. Synthliboramphus antiquus es una especie de ave marina subártica que se reproduce en islas desde British Columbia a través de Alaska hasta China. En este estudio estimamos el grado de diferenciación genética y de flujo génico entre poblaciones localizadas dentro de British Columbia y a través del Pacífico Norte. Nos basamos en la variación en secuencias de la región control y el gen citocromo b del ADN mitocondrial. Los resultados sugieren baja diferenciación genética y alto flujo génico mediado por las hembras entre las colonias de British Columbia, lo que es consistente con estudios de aves anilladas. Sorprendentemente, la diferenciación genética parece ser baja y el flujo génico alto entre British Columbia y Asia. El tamaño efectivo de la población de hembras parece estar estable, pero la especie podría haber expandido su rango de distribución. Estos resultados sugieren que los S. antiquus de todo el Pacífico Norte pueden representar una sola unidad de manejo en términos de conservación.
The importance of sympatric speciation (the evolution of reproductive isolation between codistributed populations) in generating biodiversity is highly controversial. Whereas potential examples of sympatric speciation exist for plants, insects, and fishes, most theoretical models suggest that it requires conditions that are probably not common in nature, and only two possible cases have been described for tetrapods. One mechanism by which it could occur is through allochronic isolation—separation of populations by breeding time. Oceanodroma castro (the Madeiran or band-rumped storm-petrel) is a small seabird that nests on tropical and subtropical islands throughout the Atlantic and Pacific Oceans. In at least five archipelagos, different individuals breed on the same islands in different seasons. We compared variation in five microsatellite loci and the mitochondrial control region among 562 O. castro from throughout the species' range. We found that sympatric seasonal populations differ genetically within all five archipelagos and have ceased to exchange genes in two. Population and gene trees all indicate that seasonal populations within four of the archipelagos are more closely related to each other than to populations from the same season from other archipelagos; divergence of the fifth sympatric pair is too ancient for reliable inference. Thus, seasonal populations appear to have arisen sympatrically at least four times. This is the first evidence for sympatric speciation by allochrony in a tetrapod, and adds to growing indications that population differentiation and speciation can occur without geographic barriers to gene flow.
Despite recent advances in population genetic theory and empirical research, the extent of genetic differentiation among natural populations of animals remains difficult to predict. We reviewed studies of geographic variation in mitochondrial DNA in seabirds to test the importance of various factors in generating population genetic and phylogeographic structure. The extent of population genetic and phylogeographic structure varies extensively among species. Species fragmented by land or ice invariably exhibit population genetic structure and most also have phylogeographic structure. However, many populations (26 of 37) display genetic structure in the absence of land, suggesting that other barriers to gene flow exist. In these populations, the extent of genetic structure is best explained by nonbreeding distribution: almost all species with two or more population-specific nonbreeding areas (or seasons) have phylogeographic structure, and all species that are resident at or near breeding colonies year-round have population genetic structure. Geographic distance between colonies and foraging range appeared to have a weak influence on the extent of population genetic structure, but little evidence was found for an effect of colony dispersion or population bottlenecks. In two species (Galapagos petrel, Pterodroma phaeopygia, and Xantus's murrelet, Synthliboramphus hypoleucus), population genetic structure, and even phylogeographic structure, exist in the absence of any recognizable physical or nonphysical barrier, suggesting that other selective or behavioural processes such as philopatry may limit gene flow. Retained ancestral variation may be masking barriers to dispersal in some species, especially at high latitudes. Allopatric speciation undoubtedly occurs in this group, but reproductive isolation also appears to have evolved through founder-induced speciation, and there is strong evidence that parapatric and sympatric speciation occur. While many questions remain unanswered, results of the present review should aid conservation efforts by enabling managers to predict the extent of population differentiation in species that have not yet been studied using molecular markers, and, thus, enable the identification of management units and evolutionary significant units for conservation.
Avian migration is a widespread, complex behavior that has long fascinated both scientists and the general public. Nonetheless, we have not identified the genetic and environmental controls of migration. Comparisons of migratory strategies within and among species suggest that these differences are associated with genetic and personality variation. Recently, studies have identified possible candidate genes for personality and migration in several avian taxa. Partially migratory species—those in which only some individuals migrate, while others remain resident year round—provide good study systems to test whether variation at candidate loci covaries with variation in migratory behavior. Using both a population genetic and a linear model approach, we tested whether genetic variation at 2 candidate genes (adenylate cyclase activating polypeptide 1, ADCYAP1, and dopamine receptor, DRD4) underlies variation in migratory behavior in the Western Bluebird (Sialia mexicana), a partial migrant, and the closely related Mountain Bluebird (S. currucoides), an obligate migrant, breeding in the Okanagan Valley, British Columbia. Our analyses suggested that DRD4, a gene usually associated with personality, might explain some of the propensity to migrate, but provided no evidence that ADCYAP1, a gene usually associated with the propensity to migrate, explained variation in migratory behavior in these species. Our results join a growing body of literature suggesting the effects of candidate genes are not generalizable across species or populations.
Abstract Investigating the extent (or the existence) of local adaptation is crucial to understanding how populations adapt. When experiments or fitness measurements are difficult or impossible to perform in natural populations, genomic techniques allow us to investigate local adaptation through the comparison of allele frequencies and outlier loci along environmental clines. The thick‐billed murre ( Uria lomvia ) is a highly philopatric colonial arctic seabird that occupies a significant environmental gradient, shows marked phenotypic differences among colonies, and has large effective population sizes. To test whether thick‐billed murres from five colonies along the eastern Canadian Arctic coast show genomic signatures of local adaptation to their breeding grounds, we analyzed geographic variation in genome‐wide markers mapped to a newly assembled thick‐billed murre reference genome. We used outlier analyses to detect loci putatively under selection, and clustering analyses to investigate patterns of differentiation based on 2220 genomewide single nucleotide polymorphisms ( SNP s) and 137 outlier SNP s. We found no evidence of population structure among colonies using all loci but found population structure based on outliers only, where birds from the two northernmost colonies (Minarets and Prince Leopold) grouped with birds from the southernmost colony (Gannet), and birds from Coats and Akpatok were distinct from all other colonies. Although results from our analyses did not support local adaptation along the latitudinal cline of breeding colonies, outlier loci grouped birds from different colonies according to their non‐breeding distributions, suggesting that outliers may be informative about adaptation and/or demographic connectivity associated with their migration patterns or nonbreeding grounds.
