Bo Jing

Tianjin University

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Qingzhong Li

Yantai University

Jianbo Cheng

China University of Geosciences (Beijing)

Baoan Gong

Yantai Nanshan University

Wenzuo Li

Yantai University

Jiazhong Sun

Zhongnan Hospital of Wuhan University

Yifu Chen

Shanghai University of International Business and Economics

Junbo Gong

State Key Laboratory of Chemical Engineering

Zhenbo Liu

Northeast Forestry University

Zhen-Bo Liu

Yantai University

Zewei Chang

Collaborative Innovation Center of Chemical Science and Engineering Tianjin

Cooperative Institutions

Yantai University

Jilin University

University of Oxford

Chinese Academy of Sciences

Ministry of Education of the People's Republic of China

Peking University

ETH Zurich

Sichuan Agricultural University

State Council of the People's Republic of China

Tianjin University

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Rotavirus mRNAS are released by transcript-specific channels in the double-layered viral capsid

Proceedings of the National Academy of Sciences (2013)

Javier Periz Cristina Celma Bo Jing Justin N. M. Pinkney Polly Roy

Rotaviruses are the single most common cause of fatal and severe childhood diarrheal illness worldwide (>125 million cases annually). Rotavirus shares structural and functional features with many viruses, such as the presence of segmented double-stranded RNA genomes selectively and tightly packed with a conserved number of transcription complexes in icosahedral capsids. Nascent transcripts exit the capsid through 12 channels, but it is unknown whether these channels specialize in specific transcripts or simply act as general exit conduits; a detailed description of this process is needed for understanding viral replication and genomic organization. To this end, we developed a single molecule assay for capturing and identifying transcripts extruded from transcriptionally active viral particles. Our findings support a model in which each channel specializes in extruding transcripts of a specific segment that in turn is linked to a single transcription complex. Our approach can be extended to study other viruses and transcription systems.

Transcription

10.1073/pnas.1220345110

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Citations (50)

Competition and cooperativity between hydrogen bond and σ-hole bond in SCS–(HF)n (n=1 and 2) systems

Journal of Molecular Structure THEOCHEM (2010)

Qingzhong Li Bo Jing Zhenbo Liu Wenzuo Li Jianbo Cheng

Natural bond orbital

Triple bond

Trimer

Three-center two-electron bond

Bond energy

Single bond

Acceptor

Cooperativity

Low-barrier hydrogen bond

10.1016/j.theochem.2010.04.027

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Citations (14)

Theoretical study of halogen–hydride halogen bonds in F₃CL ··· HM (L=Cl, Br; M=Li, BeH, MgH) complexes

Molecular Physics (2010)

Qingzhong Li Huifu Yuan Bo Jing Zhenbo Liu Wenzuo Li

Abstract Quantum chemical calculations have been performed on six halogen–hydride halogen bonded complexes with F3CCl or F3CBr as the halogen donor and metal hydride (HLi, HBeH and HMgH) as the halogen acceptor. At the MP2/6-311++G(d,p) level, the interaction strength spans from 2.62 to 17.68 kJ mol–1. The C–Cl and C–Br bonds are contracted. However, no evident blue shift accompanies this contraction. The H–Li bond is also contracted, but the H–He and H–Mg bonds are lengthened. However, a blue shift occurs for all these bond-stretching vibrations. These properties were analysed using the theory of natural bond orbital (NBO) and atoms in molecules (AIM). A symmetry-adapted perturbation theory (SAPT) analysis was also carried out to unveil the nature of this novel interaction. It is demonstrated that the electrostatic interaction plays a main role in the interaction, although induction and dispersion interactions are also important. Keywords: halogen–hydride halogen bondblue shiftdihydrogen bondσ–hole interactionsymmetry-adapted perturbation theory Acknowledgements This work was supported by the National Natural Science Foundation of China (Grant No. 20973149). It was also supported, in part, by an open project of the State Key Laboratory of Supramolecular Structure and Materials (SKLSSM200909), Jilin University, China.

Natural bond orbital

Halogen bond

Atoms in molecules

10.1080/00268971003630703

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Citations (21)

On the Development of Temple Architecture of Bonpo Sect

Journal of the Second Northwest University for Nationalities (2006)

Bo Jing

Religious architecture stems from religious culture and is also an important carrier of the very culture.The temples of different religious sects vividly reflect the development of corresponding religious culture.Based on documents and field work,the writer combines the history of Bonpo Sect and the development of its temples;conducts a tentative study of development,distribution and architecture characteristics of Bonpo temples in Tibetan area;offers a detailed description of such temples through two examples so as to help promote the understanding of such religious architecture.Moreover,a better understanding of such architecture also helps the overall and comprehensive understanding of colorful Tibetan culture.

Sect

Temple

Source

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Some measures for making halogen bonds stronger than hydrogen bonds in H₂CS–HOX (X = F, Cl, and Br) complexes

Physical Chemistry Chemical Physics (2010)

Qingzhong Li Bo Jing Ran Li Zhen-Bo Liu Wenzuo Li

The properties and applications of halogen bonds are dependent greatly on their strength. In this paper, we suggested some measures for enhancing the strength of the halogen bond relative to the hydrogen bond in the H(2)CS-HOX (X = F, Cl, and Br) system by means of quantum chemical calculations. It has been shown that with comparison to H(2)CO, the S electron donor in H(2)CS results in a smaller difference in strength for the Cl halogen bond and the corresponding hydrogen bond, and the Br halogen bond is even stronger than the hydrogen bond. The Li atom in LiHCS and methyl group in MeHCS cause an increase in the strength of halogen bonding and hydrogen bonding, but the former makes the halogen bond stronger and the latter makes the hydrogen bond stronger. In solvents, the halogen bond in the Br system is strong enough to compete with the hydrogen bond. The interaction nature and properties in these complexes have been analyzed with the natural bond orbital theory.

Halogen bond

Three-center two-electron bond

Low-barrier hydrogen bond

10.1039/c0cp01543a

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Citations (65)

Desolvation induced crystal jumping: reversible hydration and dehydration of a spironolactone–saccharin cocrystal with water as the jumping-mate

CrystEngComm (2021)

Yifu Chen Bo Jing Zewei Chang Junbo Gong

We present a spironolactone–saccharin cocrystal hydrate as the first example of a crystal that jumps without changes in either the lattice parameter or the molecular conformation to highlight the unique advantages of the jumping-mate strategy.

Cocrystal

Saccharin

Crystal (programming language)

10.1039/d1ce00830g

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Citations (10)

Hydrogen bond and σ‐hole interaction in M₂C=S···HCN (M = H, F, Cl, Br, HO, H₃C, H₂N) complex: Dual roles of C=S group and substitution effect

International Journal of Quantum Chemistry (2011)

Bo Jing Qingzhong Li Baoan Gong Ran Li Zhenbo Liu

Abstract An ab initio computational study of the dual functions of CS group in the M 2 CS ··· HCN (M = H, F, Cl, Br, HO, H 3 C, H 2 N) complex has been performed at the MP2(Full)/aug‐cc‐pVTZ level. The CS group can act as both the electron donor and acceptor, thus two minima complexes were found for each molecular pairs. The interaction energy of hydrogen bond in the F, Cl, or Br substituted complexes is less negative than that in the corresponding H 2 CS one, while the interaction energy of the σ‐hole interaction is more negative. The OH substitution weakens the hydrogen bond, whereas the H 3 C and H 2 N substitution strengthens it. The σ‐hole interaction in the HO, H 3 C, and H 2 N complexes is very weak. The substitution effect has been understood with electrostatic induction and conjugation effects. The energy decomposition analysis has been performed for the halogen‐substituted complexes. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012.

Acceptor

Interaction energy

Halogen bond

10.1002/qua.23006

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Citations (13)

Comparative study of XO···ClF and XS···ClF (X = H, CH₃, and F) halogen‐bonded complexes

International Journal of Quantum Chemistry (2010)

Qingzhong Li Bo Jing Zhenbo Liu Wenzuo Li Jianbo Cheng

Abstract Quantum chemical calculations have been performed to study the single‐electron halogen bonds in HO···ClF and HS···ClF complexes. The calculation methods have a larger effect on the S···Cl halogen bond than on the O···Cl one. The interaction strength in HO···ClF complex is stronger than that in HS···ClF one, but the presence of methyl group in the halogen acceptor makes the sequence reverse. The methyl group has a greater effect on the S···Cl halogen bond than on the O···Cl one. The charge analyses indicate that the methyl group is electron‐donating and the electron‐donating role in the H 3 CSClF complex is larger than in the H 3 COClF one. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011

Halogen bond

Natural bond orbital

Quantum chemical

Acceptor

Electron acceptor

10.1002/qua.22841

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Citations (2)

CCDC 1967489: Experimental Crystal Structure Determination

The Cambridge Structural Database (2022)

Yifu Chen Bo Jing Jie Li Junbo Gong

An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.

10.5517/ccdc.csd.cc241bdy

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Theoretical study of halogen bonding between FnH3−nCBr (n=0, 1, 2, 3) and HMgH

Journal of Molecular Structure THEOCHEM (2009)

Qingzhong Li Huifu Yuan Bo Jing Zhen-Bo Liu Wenzuo Li

Halogen bond

Non-covalent interactions

Electrostatic interaction

Atoms in molecules

Interaction energy

Electrostatics

Weak interaction

10.1016/j.theochem.2009.12.024

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Citations (30)