Garlic is a plant has been used as a flavor, and anti-microbial and anti-diarrheal agent. Infectious bronchitis virus (IBV) is a coronavirus. The available vaccines against IBV cannot cover new variants. This study evaluated the inhibitory effects of garlic extract on IBV.The constituents of garlic extract were detected by gas chromatography. This study was done in four groups of embryonic SPF eggs; first group was used for virus titration; second group received the mixture of different virus titration and constant amount of garlic extract; third group received 10(-3) titration of virus and after 8 hr received garlic extract and the last group received different dilutions of garlic extract.Based on our results, in the second group, IBV vaccine strain (4/91) at all titration and M41 in 10(-2) and 10(-3) titration and in the third group both variants of virus the embryonic Index (EI) was significantly increased.The garlic extract had inhibitory effects on IBV in the chickens embryo.
BACKGROUND: Lumpy skin disease (LSD) is a significant viral disease of cattle sometimes found in Iran. OBJECTIVES: The aim of this study was the molecular detection of LSD virus (LSDV) and the determination of their relationship with other Iranian isolates. Moreover, the origin and spread of these viruses were evaluated. METHODS: The lymph node samples taken from clinically affected cattle from the Kurdistan province of Iran were tested for LSDV using the polymerase chain reaction (PCR). RESULTS: The partial P32 gene of LSDV was detected by PCR, sequenced, and phylogenetically analyzed. The LSDVs detected in the present study were 42.98%-100% similar to other LSDVs of Iran. CONCLUSIONS: Iranian LSDV isolates in this research had the highest similarity to the isolates found in the Indian regions. However, they showed the lowest nucleotide identity with the countries located in the west and southwest of Iran, namely Turkey and Saudi Arabia LSDVs. It could be concluded that these viruses have entered Iran from the eastern borders. It seems that the monitoring of the country borders should be taken into consideration. Further studies should be carried out on LSDV pathogenesis and molecular epidemiology.
In September 2017, an outbreak with high mortality, which showed the typical signs of ND, occurred among a flock of more than 2000 Eurasian collared doves in Konarak, southeast of Iran. A confirmed pigeon paramyxovirus type 1 strain was isolated from the brain tissues of the dead doves. The isolate, which was called Pigeon/Iran/Konarak/Barin/2017, was classified as a highly velogenic NDV. Complete genome sequencing and phylogenetic analysis showed that the isolate belonged to subgenotype XXI.2, which has never been reported from Iran before. The isolate had the highest homology (96.15%) with early 2010s Italian isolates. Further studies will be required to understand the diversity better.
Abstract Caliciviruses are (+) RNA viruses with a worldwide distribution and wide host range, including humans and birds. The family caliciviridae consists of eleven genera, two of which, bavovirus and nacovirus , are found in chickens affected by stunting syndrome. In this study, for the first time the presence of calicivirus in Iranian broiler flocks was investigated by viral metagenomics method. Fecal samples were collected from broiler chicken farms affected with diarrhea from Gilan province Iran. Our results showed that some of the diseased chickens carried a genus of calicivirus belonging to bavovirus . The complete 7824 nt genome of this bavovirus , named UT Shahhosseini1 2018, was sequenced and characterized. Phylogenetic analysis revealed that our calicivirus shared 87% similarity to the closest strains, including the German calicivirus chicken/V0021/Bayern/2004, suggesting that the avian- derived strain belongs to the bavoviruses . Conserved motifs shared between bavoviruses further confirmed this finding. Phylogenetic analysis of nonstructural (NS) and VP proteins also revealed similar values. This is the first report and first complete genome sequence of bavovirus in Iran. However, further studies are needed to obtain a better epidemiological picture of the abundance avian-origin caliciviruses of in Iranian bird populations, including poultry. The pathogenic potential of these caliciviruses to affect poultry production should also be investigated.
Different genotypes of infectious bronchitis virus (IBV) in poultry are circulating worldwide. The most efficient classification system for IBV genotypes is based on the complete sequencing of S1 gene, and the target organ can be trachea, kidney, oviduct, lung, esophagus, proventriculus, intestine, liver, spleen, bursa, cecal tonsils, cloaca, and testis. In Iran, IBV genotyping is usually performed by partial sequencing of S1 gene, and the trachea is often selected for sampling. This study applies a different genotyping method, and compares the results with the routine method of genotyping. Samples were collected from the trachea and kidneys of 50 broiler flocks with respiratory symptoms. The presence of IBV was confirmed by a real-time RT-PCR analysis targeting the 5'UTR region of the genome. Genotype of positive samples was determined by two methods of partial S1 gene sequencing and genotype-specific primers. In the real-time RT-PCR test, 88% and 90% of tracheal and kidney samples showed positive results, respectively. When the S gene was sequenced, Variant 2 (GI-23) (68.18%), 793/B (GI-13) (22.73%), Massachusetts (GI-1) (6.82%), and QX (GI-19) (2.27%) were detected in the tracheal samples, whereas QX (GI-19) and Massachusetts (GI-1) were not diagnosed in the kidney samples. In the genotypespecific method, IBV genotypes Variant 2, 793/B, Massachusetts, and QX were detected in both tracheal and kidney samples. The results of genotype-specific method also demonstrated that 70% of tracheal samples and 62% of kidney samples were infected with a single IBV genotype, while 30% of tracheal samples and 38% of kidney samples were coinfected with different IBV types. When comparing two genotyping methods, the use of genotype-specific primers was superior to partial S1 gene sequencing, not only in detecting different IBV types, but also in efficiently applying them in both trachea and kidney.
'%3e%3cg id='e'%3e%3cg id='c' fill='none' stroke='%23fff' stroke-width='2'%3e%3cpath id='b' d='M0 1h26M1 10V5h8v4h8V5h-5M4 9h2m20 0h-5V5h8m0-5v9h8V0m-4 0v9' transform='scale(1.4)'/%3e%3cpath id='a' d='M0 7h9m1 0h9' transform='scale(2.8)'/%3e%3cuse xlink:href='%23a' y='120'/%3e%3cuse xlink:href='%23b' y='145.2'/%3e%3c/g%3e%3cg id='d'%3e%3cuse xlink:href='%23c' x='56'/%3e%3cuse xlink:href='%23c' x='112'/%3e%3cuse xlink:href='%23c' x='168'/%3e%3c/g%3e%3c/g%3e%3cuse xlink:href='%23d' x='168'/%3e%3cuse xlink:href='%23e' x='392'/%3e%3c/g%3e%3cg fill='%23da0000' transform='matrix(45 0 0 45 315 180)'%3e%3cg id='f'%3e%3cpath d='M-.548.836A.912.912 0 0 0 .329-.722 1 1 0 0 1-.548.836'/%3e%3cpath d='M.618.661A.764.764 0 0 0 .422-.74 1 1 0 0 1 .618.661M0 1l-.05-1L0-.787a.31.31 0 0 0 .118.099V-.1l-.04.993zM-.02-.85 0-.831a.144.144 0 0 0 .252-.137A.136.136 0 0 1 0-.925'/%3e%3c/g%3e%3cuse xlink:href='%23f' transform='scale(-1 1)'/%3e%3c/g%3e%3c/svg%3e)
